Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900618.1_cds_XP_016450614.1_45049
CDS Infomation

[gene=LOC107775404] [db_xref=GeneID:107775404] [protein=linoleate 9S-lipoxygenase 5, chloroplastic-like] [protein_id=XP_016450614.1] [location=join(84132..84318,84403..84689,84767..85001,85098..85427,85512..85597,90192..90281,90438..90736,90813..91076,91844..92612)] [gbkey=CDS]
Sequence

ATGGAACATTCAAGGATAATTGATTGTCTGAATGGTTTTCAAGGAAGTGTGAAGGCTCAA
CTGGCCAAAAGCAAGAAACATACAGAGTCCATTAAAGGAGAAATCATCATTCAACATTGC
CCTGCAAAATCAAGCCTTGGAAAAGCTATTCGTATTCAACTATACAGTCTCTCTAAAATT
GACCCAAGTACGGGGAAAGGGAAGCTGAGTCAAGAAGTGCACCCCAATCATGGGAAACGT
ATCCACAACAAGCCTAATGGTAACAGAGGTTTTCAGTATGAATTGACATTCGAGGTTGAC
AGAGATTTTGGATTTCCAGGAGCTTTTGTCATCTGGAACCAGCACAAACACAAGTTTTTT
CTTCAATCAATATCTCTCCAAGTTATATTCAGACAGATGGTTCATTTTGAATGCAATTCT
TGGATTTATCCCAATCATTTAATTCAAACAGCAAGGATTTTTTTCTCAAACACTTGTTAT
CTTCCAAGCCAAACACCAAATAGTCTCCTGCAACTGAGGAAACAAGAACTTGATACCTTG
AGAGGAGATGGAACTGCAGGGAGCATTAGAGAATGGCATCGAGTTTATGACTACGATTTC
TATAATGATCTCGGTGATCCTCAGAGAGGGGAAAGGCCTGTTTTAGGAGGTTCAGTTTCT
TATCCATATCCAAGGAGAGGAAAAAATGGTGAACCACATATTCATTCAGAAAAAGAGAAG
GGGATGTTCAAGATAGACAGCTGTATCCCTCCAGATGAAAGATTTAGCCCCGAGAAACTA
TCAGAGATTGCGAAGAAAGTTATCCAGGCCTCTTTGCACTATGTTGTTTCTCAGGGGGGA
TCGATGTTAAGAGAAGAAACCAACCAATTCAAGTCATTCAATGAAATCAAAGAGCTATTT
TCGGGAAAGAAAAGCCAAGGGGTGGAAGAATGGATGATAAGGAAACTGGAAACTCATCTA
CCAAAAGAGATTTTCAAGGAGACTGAACGTGGGATCAAAGGTTACACAGCAAAGTTTCCA
ATGCCTCAGTTATTTACAGGGAACGAACTTGCATGGAAGGATGATAAGGAGTTTGGGCGT
CAGATGCTTGCAGGAATTAATGCAACTCTAATTCAGTGTTTGCAGGCTTTTCCACCGAGA
AGCAAGAATGGAATATGGAGTTCAATAAGAAGATCACACATAGAACAAAACCTTGATGGC
CTCACTCTTCAAGAGGCAATGAACCAATGGAGGATTTTCATCTTGGACCACCATGACTAC
CTCATGCCATTTTTAGGAAAAATAAACAAAAATGGTGTATGTGCCTATGCATCCAGAACT
TTGCTATTCTTAAAGGACGATGCCACGCTAAAGCCATTGGCAATAGAACTAAGTTTACCA
GGGCTGTCATCTGGCACTGAGATCCACAGGGTATTTCGTCCAGGGACCAATGGATCAGAG
GCAGCCTTATGGCAGCTTGCTAAAGTTCATGTGGCAGTAAACGACTCTGGTTATCATCAG
CTAATCAGCCACTGGCTAAAAACTCATGCAGTTGTAGAGCCATTCATTATTGCCACCAGA
AGGCAGTTGAGTGTTATGCACCCGATTCACCGGTTATTGGATCCTCATTTCAAGGACACT
ATGCATACTAATGCACTGGCTCGGATTACTGTCTTAAAAGCTGGAGGAATCTTCGAGAAG
AGCCTTTATTCTGGAGAAGCCTCGATGGAGCTATCTTCTTCACTCTATAAGGAATGGAGA
TTTGATGAACAAAGCCTCCCTGGTGATTTGGTGAAAAGAGGTTTGGCTTTCCAGAACCCA
GAATGCCTGGCTGGGGTTCAGCTTCTCTTTGAAGACTATCCATATGGTGCAGATGGACTA
GAAATCTGGGTAGCAACCAAGAGATGGGTAACAGACTTTTGTCGATATTTCTACAAGGAT
GATAATTCCCTGAGATCTGACCATGAGATCCAAGAATGGTGGTCAGAGATTAGGAAAATT
GGTCATGGAGACAAGTGTAACGAAACATGGTGGAGCTCAATGACTACCGTCTCTGACCTA
GTAGAGGCTCTCACAACCCTTATATGGATTTCCTCAGGTCTTCATGCTTCAGTTAACTTG
GGACAATATGAATATGCGGGTCATCCACTAAATCGCCCAACCAAATGTCGGAATTTCATC
GCGATGGAAGGGACAAGAGAGTACGCAGAGTTTCTCCATGACCCAGACAAGTTCTTTCTC
AACATGTTACCCAACAGGTCTGAGATTACCCTATATTTGGCGCTATTAGAGGTACTGTCA
GCGCATACATCTGATGAAGTATACTTGGGTCAACGACAATCTCCAAACTGGATAGATGAC
GTATGGGTAAAGCAAAGGTTAGAGCAATTTGCCGAGGAACTTAACGAAGTGCATAAAAGG
ATAGTGGAGAGAAATGCAGATTCCAAACTTAAGAACAGACAGGGGCCGTCCAATATCCCG
TACAAGCTTCTGGACCCTACAGTCTCCAATGTTAAATCAGGCCAGGGTATCACAGCAACA
GGGATACCTAATAGCATATCCATGTAA

Peptide Sequence

PEP ID

XP_016450614.1
PEP Infomation

PREDICTED: linoleate 9S-lipoxygenase 5, chloroplastic-like [Nicotiana tabacum]
Sequence

MEHSRIIDCLNGFQGSVKAQLAKSKKHTESIKGEIIIQHCPAKSSLGKAIRIQLYSLSKI
DPSTGKGKLSQEVHPNHGKRIHNKPNGNRGFQYELTFEVDRDFGFPGAFVIWNQHKHKFF
LQSISLQVIFRQMVHFECNSWIYPNHLIQTARIFFSNTCYLPSQTPNSLLQLRKQELDTL
RGDGTAGSIREWHRVYDYDFYNDLGDPQRGERPVLGGSVSYPYPRRGKNGEPHIHSEKEK
GMFKIDSCIPPDERFSPEKLSEIAKKVIQASLHYVVSQGGSMLREETNQFKSFNEIKELF
SGKKSQGVEEWMIRKLETHLPKEIFKETERGIKGYTAKFPMPQLFTGNELAWKDDKEFGR
QMLAGINATLIQCLQAFPPRSKNGIWSSIRRSHIEQNLDGLTLQEAMNQWRIFILDHHDY
LMPFLGKINKNGVCAYASRTLLFLKDDATLKPLAIELSLPGLSSGTEIHRVFRPGTNGSE
AALWQLAKVHVAVNDSGYHQLISHWLKTHAVVEPFIIATRRQLSVMHPIHRLLDPHFKDT
MHTNALARITVLKAGGIFEKSLYSGEASMELSSSLYKEWRFDEQSLPGDLVKRGLAFQNP
ECLAGVQLLFEDYPYGADGLEIWVATKRWVTDFCRYFYKDDNSLRSDHEIQEWWSEIRKI
GHGDKCNETWWSSMTTVSDLVEALTTLIWISSGLHASVNLGQYEYAGHPLNRPTKCRNFI
AMEGTREYAEFLHDPDKFFLNMLPNRSEITLYLALLEVLSAHTSDEVYLGQRQSPNWIDD
VWVKQRLEQFAEELNEVHKRIVERNADSKLKNRQGPSNIPYKLLDPTVSNVKSGQGITAT
GIPNSISM

Transcript Sequence

Gene sequence data has not been registered.